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  5. Seita.1G358800.1

Seita.1G358800.1


Description : Unknown function


Gene families : OG_42_0000384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G358800.1
Cluster HCAA Clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
At2g22680 No alias E3 ubiquitin-protein ligase WAVH1... 0.02 Orthogroups_2024-Update
Cre09.g395843 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Glyma.02G218200 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Glyma.11G197001 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Glyma.12G077333 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Glyma.14G185600 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Glyma.20G180551 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G088580.4 No alias Unknown function 0.06 Orthogroups_2024-Update
MA_129331g0010 No alias (at5g60710 : 474.0) Zinc finger (C3HC4-type RING finger)... 0.02 Orthogroups_2024-Update
PSME_00047144-RA No alias (at2g38970 : 509.0) Zinc finger (C3HC4-type RING finger)... 0.03 Orthogroups_2024-Update
Seita.9G230200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g076860 No alias Zinc finger (C3HC4-type RING finger) family protein... 0.04 Orthogroups_2024-Update
Sopen02g018610 No alias von Willebrand factor type A domain 0.04 Orthogroups_2024-Update
evm.model.tig00000802.25 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 104 133
IPR002035 VWF_A 291 470
IPR032838 Vwaint_dom 635 707
No external refs found!