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  5. Seita.1G376400.1

Seita.1G376400.1


Description : histone demethylase *(KDM3)


Gene families : OG_42_0000491 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.1G376400.1
Cluster HCAA Clusters: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
At1g62310 No alias Transcription factor jumonji (JmjC) domain-containing... 0.04 Orthogroups_2024-Update
Glyma.11G203300 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.05 Orthogroups_2024-Update
Glyma.13G247400 No alias Zinc finger, RING-type;Transcription factor... 0.03 Orthogroups_2024-Update
Glyma.20G104900 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003347 JmjC_dom 435 538
No external refs found!