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  5. Seita.2G004800.1

Seita.2G004800.1


Description : Unknown function


Gene families : OG_42_0000304 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000304_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G004800.1
Cluster HCAA Clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
403769 No alias Peroxidase superfamily protein 0.05 Orthogroups_2024-Update
At2g18980 No alias Peroxidase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q96518] 0.02 Orthogroups_2024-Update
Glyma.05G103600 No alias root hair specific 19 0.04 Orthogroups_2024-Update
Mp3g20400.1 No alias Peroxidase 22 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Sopen02g022220 No alias Peroxidase 0.02 Orthogroups_2024-Update
Sopen02g031930 No alias Peroxidase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA 16Dec
BP GO:0006979 response to oxidative stress IEA 16Dec
MF GO:0020037 heme binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase_pln/fun/bac 59 292
No external refs found!