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  5. Seita.2G011300.1

Seita.2G011300.1


Description : Unknown function


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G011300.1
Cluster HCAA Clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G035400 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.01G035800 No alias NB-ARC domain-containing disease resistance protein 0.05 Orthogroups_2024-Update
Glyma.03G048301 No alias disease resistance protein (TIR-NBS-LRR class) 0.02 Orthogroups_2024-Update
Glyma.19G137200 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G000760.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os09g20030 No alias disease resistance RPP13-like protein 1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g20040 No alias resistance-like protein I2GA-SH194-2, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G199575 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Potri.012G032400 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Potri.017G015300 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.017G121700 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.017G137851 No alias target of AVRB operation1 0.03 Orthogroups_2024-Update
Potri.018G080700 No alias NB-ARC domain-containing disease resistance protein 0.04 Orthogroups_2024-Update
Seita.8G244000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G101000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc11g065800 No alias Disease resistance protein (AHRD V3.3 *-* A0A068EW50_SOLHA) 0.04 Orthogroups_2024-Update
Sopen08g003600 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 680 721
IPR002182 NB-ARC 169 411
IPR001611 Leu-rich_rpt 729 786
No external refs found!