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Description : GARP subgroup HHO transcription factor
Gene families : OG_42_0002261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002261_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica: Seita.2G013500.1 | |
| Cluster | HCAA Clusters: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_18952 | No alias | myb family transcription factor efm | 0.03 | Orthogroups_2024-Update | |
| Glyma.01G183700 | No alias | Homeodomain-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.11G058600 | No alias | Homeodomain-like superfamily protein | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
| MF | GO:0004788 | thiamine diphosphokinase activity | IEP | Predicted GO |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Predicted GO |
| BP | GO:0006260 | DNA replication | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006417 | regulation of translation | IEP | Predicted GO |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0009229 | thiamine diphosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
| BP | GO:0010038 | response to metal ion | IEP | Predicted GO |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010608 | posttranscriptional regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0016755 | transferase activity, transferring amino-acyl groups | IEP | Predicted GO |
| MF | GO:0016756 | glutathione gamma-glutamylcysteinyltransferase activity | IEP | Predicted GO |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Predicted GO |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Predicted GO |
| BP | GO:0017148 | negative regulation of translation | IEP | Predicted GO |
| BP | GO:0019748 | secondary metabolic process | IEP | Predicted GO |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
| MF | GO:0030597 | RNA glycosylase activity | IEP | Predicted GO |
| MF | GO:0030598 | rRNA N-glycosylase activity | IEP | Predicted GO |
| MF | GO:0030975 | thiamine binding | IEP | Predicted GO |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0032269 | negative regulation of cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0034249 | negative regulation of cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0042357 | thiamine diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Predicted GO |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Predicted GO |
| BP | GO:0046937 | phytochelatin metabolic process | IEP | Predicted GO |
| BP | GO:0046938 | phytochelatin biosynthetic process | IEP | Predicted GO |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Predicted GO |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | Predicted GO |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Predicted GO |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |