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  5. Seita.2G023700.1

Seita.2G023700.1


Description : Unknown function


Gene families : OG_42_0000127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G023700.1
Cluster HCAA Clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Bradi1g58711 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi3g01723 No alias Function unknown 0.02 Orthogroups_2024-Update
Bradi4g10105 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU2Hr1G070290.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G014370.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os10g04900 No alias OsFBX364 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.2G009900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G016000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.005G023000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!