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  5. Seita.2G026400.1

Seita.2G026400.1


Description : Unknown function


Gene families : OG_42_0001062 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G026400.1
Cluster HCAA Clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
PSME_00038599-RA No alias (at1g10020 : 430.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
PSME_00054930-RA No alias (at5g17640 : 459.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
Solyc04g077140 No alias DUF1005 family protein (AHRD V3.3 *** G7J413_MEDTR) 0.02 Orthogroups_2024-Update
Sopen12g003540 No alias Protein of unknown function (DUF1005) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR010410 DUF1005 1 463
No external refs found!