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  5. Seita.2G035200.1

Seita.2G035200.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G035200.1
Cluster HCAA Clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
At1g68360 No alias Zinc finger protein GIS3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9H1] 0.03 Orthogroups_2024-Update
At3g23130 No alias Uncharacterized protein At3g23130 (Fragment)... 0.03 Orthogroups_2024-Update
At5g06650 No alias Zinc finger protein GIS2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG05] 0.02 Orthogroups_2024-Update
At5g57520 No alias Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261] 0.05 Orthogroups_2024-Update
Bradi4g30910 No alias zinc finger protein 2 0.02 Orthogroups_2024-Update
Brara.A00906.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G082686 No alias zinc finger protein 7 0.02 Orthogroups_2024-Update
GRMZM2G089448 No alias C2H2-like zinc finger protein 0.04 Orthogroups_2024-Update
Glyma.02G029100 No alias zinc finger protein 6 0.03 Orthogroups_2024-Update
Glyma.03G160700 No alias zinc finger protein 11 0.03 Orthogroups_2024-Update
Glyma.03G217900 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G273800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G059500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G269400 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G295500 No alias zinc finger protein 6 0.02 Orthogroups_2024-Update
Glyma.20G012700 No alias zinc finger protein 4 0.03 Orthogroups_2024-Update
HORVU5Hr1G088860.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G118490.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
LOC_Os04g08600 No alias ZOS4-05 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_114098g0010 No alias (at1g67030 : 81.3) Encodes a zinc finger protein... 0.02 Orthogroups_2024-Update
Potri.008G121200 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G028100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Pp1s11_120V6 No alias F13M22.24; zinc finger (C2H2 type) family protein... 0.03 Orthogroups_2024-Update
Seita.2G035000.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Seita.3G391200.1 No alias C2H2 subclass ZFP transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G037300.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0032879 regulation of localization IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051270 regulation of cellular component movement IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0060632 regulation of microtubule-based movement IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!