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  5. Seita.2G050800.1

Seita.2G050800.1


Description : LRR-domain extensin


Gene families : OG_42_0000323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G050800.1
Cluster HCAA Clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
412903 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
81544 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
A4A49_27226 No alias leucine-rich repeat extensin-like protein 4 0.03 Orthogroups_2024-Update
At2g19780 No alias Leucine-rich repeat (LRR) family protein... 0.03 Orthogroups_2024-Update
Bradi2g33340 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
GRMZM2G341410 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
Glyma.04G035950 No alias Leucine-rich repeat (LRR) family protein 0.05 Orthogroups_2024-Update
Glyma.05G225300 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G016710.2 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update
Potri.010G083100 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Pp1s35_305V6 No alias leucine-rich repeat family protein extensin family protein 0.02 Orthogroups_2024-Update
Pp1s96_30V6 No alias T9E8.80; leucine-rich repeat family protein / extensin... 0.05 Orthogroups_2024-Update
Sobic.003G205600.1 No alias LRR-domain extensin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 241 299
No external refs found!