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  5. Seita.2G053200.1

Seita.2G053200.1


Description : LHC-related protein *(ELIP)


Gene families : OG_42_0000421 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G053200.1
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre08.g384650 No alias Chlorophyll A-B binding family protein 0.01 Orthogroups_2024-Update
Cre09.g394325 No alias Chlorophyll A-B binding family protein 0.01 Orthogroups_2024-Update
Cre14.g626750 No alias Chlorophyll A-B binding family protein 0.01 Orthogroups_2024-Update
PSME_00007991-RA No alias (at3g22840 : 146.0) Encodes an early light-inducible... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 76 134
No external refs found!