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  5. Seita.2G057900.1

Seita.2G057900.1


Description : Unknown function


Gene families : OG_42_0000629 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G057900.1
Cluster HCAA Clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
Bradi5g02240 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Bradi5g02430 No alias Disease resistance protein (CC-NBS-LRR class) family 0.01 Orthogroups_2024-Update
HORVU2Hr1G124130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G012470.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G049720.5 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G012400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G005800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G050700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G100200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G082850.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G041800.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G041900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G042100.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!