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  5. Seita.2G063900.1

Seita.2G063900.1


Description : Unknown function


Gene families : OG_42_0000239 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G063900.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G142357 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G088190.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os05g07950 No alias OsFBX160 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g41760 No alias OsFBX304 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Sobic.001G191100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G207500.2 No alias Unknown function 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 35 69
IPR013187 F-box-assoc_dom_typ3 246 332
No external refs found!