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  5. Seita.2G085600.1

Seita.2G085600.1


Description : component *(NF-YC) of NF-Y transcription factor complex


Gene families : OG_42_0000527 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.2G085600.1
Cluster HCAA Clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
At5g38140 No alias Nuclear transcription factor Y subunit C-10... 0.02 Orthogroups_2024-Update
Bradi4g33290 No alias nuclear factor Y, subunit C3 0.03 Orthogroups_2024-Update
Pp1s370_63V6 No alias T6H22.3; transcription factor, putative [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sopen03g030050 No alias Histone-like transcription factor (CBF/NF-Y) and archaeal histone 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 35 132
No external refs found!