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  5. Seita.2G089500.1

Seita.2G089500.1


Description : Unknown function


Gene families : OG_42_0000351 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000351_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G089500.1

Target Alias Description ECC score Gene Family Method Actions
A4A49_18591 No alias protein lurp-one-related 14 0.03 Orthogroups_2024-Update
A4A49_40421 No alias protein lurp-one-related 15 0.03 Orthogroups_2024-Update
Brara.A03032.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.A03389.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.16G070101 No alias Protein of unknown function (DUF567) 0.01 Orthogroups_2024-Update
Glyma.18G209900 No alias Protein of unknown function (DUF567) 0.02 Orthogroups_2024-Update
HORVU5Hr1G010790.2 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_101298g0010 No alias (at5g01750 : 121.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
Seita.2G089400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G090000.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.3G394500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G039000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007612 LOR 22 203
No external refs found!