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  5. Seita.2G106900.1

Seita.2G106900.1


Description : Unknown function


Gene families : OG_42_0000889 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000889_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G106900.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Brara.B03440.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00986.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G102100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G102110.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G093030.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G106500.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.2G107000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G425600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 11 100
No external refs found!