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  5. Seita.2G107300.1

Seita.2G107300.1


Description : acidic chitinase *(CHIA)


Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G107300.1
Cluster HCAA Clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Seita.5G389900.1 No alias acidic chitinase *(CHIA) 0.03 Orthogroups_2024-Update
Sobic.003G244600.1 No alias acidic chitinase *(CHIA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 29 267
No external refs found!