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  5. Seita.2G112500.1

Seita.2G112500.1


Description : EC_2.4 glycosyltransferase & granule-bound starch (amylose) synthase *(GBSS)


Gene families : OG_42_0004583 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G112500.1
Cluster HCAA Clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
149847 No alias UDP-Glycosyltransferase superfamily protein 0.04 Orthogroups_2024-Update
A4A49_14386 No alias granule-bound starch synthase 1, chloroplasticamyloplastic 0.07 Orthogroups_2024-Update
At1g32900 No alias Granule-bound starch synthase 1,... 0.03 Orthogroups_2024-Update
Brara.E01764.1 No alias EC_2.4 glycosyltransferase & granule-bound starch... 0.03 Orthogroups_2024-Update
GRMZM2G008263 No alias UDP-Glycosyltransferase superfamily protein 0.05 Orthogroups_2024-Update
Glyma.07G049900 No alias UDP-Glycosyltransferase superfamily protein 0.07 Orthogroups_2024-Update
Glyma.10G172200 No alias UDP-Glycosyltransferase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G018500 No alias UDP-Glycosyltransferase superfamily protein 0.06 Orthogroups_2024-Update
HORVU2Hr1G090980.8 No alias EC_2.4 glycosyltransferase & granule-bound starch... 0.03 Orthogroups_2024-Update
Mp1g23640.1 No alias granule-bound starch (amylose) synthase 0.03 Orthogroups_2024-Update
PSME_00003120-RA No alias (at1g32900 : 654.0) UDP-Glycosyltransferase superfamily... 0.02 Orthogroups_2024-Update
PSME_00003121-RA No alias (at1g32900 : 675.0) UDP-Glycosyltransferase superfamily... 0.02 Orthogroups_2024-Update
Sobic.002G116000.1 No alias EC_2.4 glycosyltransferase & granule-bound starch... 0.07 Orthogroups_2024-Update
Sopen08g031530 No alias Starch synthase catalytic domain 0.05 Orthogroups_2024-Update
evm.model.contig_3542.5 No alias (o82627|ssg1_antma : 380.0) Granule-bound starch... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004864 protein phosphatase inhibitor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019212 phosphatase inhibitor activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 399 523
IPR013534 Starch_synth_cat_dom 82 341
No external refs found!