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  5. Seita.2G114000.1

Seita.2G114000.1


Description : HD-ZIP IV-type transcription factor


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G114000.1
Cluster HCAA Clusters: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
A4A49_31875 No alias homeobox-leucine zipper protein meristem l1 0.03 Orthogroups_2024-Update
At2g32370 No alias Homeobox-leucine zipper protein HDG3... 0.03 Orthogroups_2024-Update
Bradi5g18717 No alias homeodomain GLABROUS 1 0.02 Orthogroups_2024-Update
Brara.H00913.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.05G248800 No alias homeodomain GLABROUS 11 0.02 Orthogroups_2024-Update
Glyma.11G003400 No alias protodermal factor 2 0.02 Orthogroups_2024-Update
HORVU1Hr1G050620.18 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G313900.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Sopen06g015560 No alias START domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005811 lipid droplet IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 63 117
IPR002913 START_lipid-bd_dom 218 437
No external refs found!