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  5. Seita.2G121800.1

Seita.2G121800.1


Description : alpha-galactosidase *(AGAL) & EC_3.2 glycosylase


Gene families : OG_42_0000657 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000657_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G121800.1
Cluster HCAA Clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Brara.B00283.1 No alias alpha-galactosidase *(AGAL) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
PSME_00004871-RA No alias (at5g08380 : 481.0) alpha-galactosidase 1 (AGAL1);... 0.04 Orthogroups_2024-Update
PSME_00005678-RA No alias (at5g08370 : 559.0) alpha-galactosidase 2 (AGAL2);... 0.04 Orthogroups_2024-Update
Solyc03g019790 No alias alpha-galactosidase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR002241 Glyco_hydro_27 64 283
No external refs found!