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  5. Seita.2G122800.1

Seita.2G122800.1


Description : Unknown function


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G122800.1
Cluster HCAA Clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
A4A49_26120 No alias expansin-b3 0.03 Orthogroups_2024-Update
At2g20750 No alias Expansin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU2] 0.03 Orthogroups_2024-Update
Bradi3g33130 No alias expansin B2 0.03 Orthogroups_2024-Update
Bradi3g33140 No alias expansin B2 0.02 Orthogroups_2024-Update
Glyma.06G294500 No alias expansin B3 0.02 Orthogroups_2024-Update
HORVU1Hr1G054230.7 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU4Hr1G088080.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g44108 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g40720 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00025248-RA No alias (q6h676|exb11_orysa : 171.0) Expansin-B11 precursor... 0.03 Orthogroups_2024-Update
Potri.019G101900 No alias expansin B3 0.03 Orthogroups_2024-Update
Pp1s147_37V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Pp1s251_59V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Pp1s313_58V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Pp1s313_59V6 No alias beta-expansin 3 0.02 Orthogroups_2024-Update
Seita.9G327100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G301300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g054170 No alias expansin B3 (AHRD V3.3 *** AT4G28250.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 123 200
IPR007117 Expansin_CBD 220 301
No external refs found!