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  5. Seita.2G127000.1

Seita.2G127000.1


Description : light chain of clathrin triskelion


Gene families : OG_42_0001289 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001289_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G127000.1
Cluster HCAA Clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G115100 No alias Clathrin light chain protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G118930.1 No alias light chain of clathrin triskelion 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA 16Dec
BP GO:0006886 intracellular protein transport IEA 16Dec
BP GO:0016192 vesicle-mediated transport IEA 16Dec
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA 16Dec
CC GO:0030132 clathrin coat of coated pit IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 148 231
No external refs found!