Seita.2G128700.1

Description : RNA editing factor *(ORRM3)

Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.2G128700.1
Cluster	HCAA Clusters: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
Glyma.12G065000	No alias	glycine-rich RNA-binding protein 2	0.04	Orthogroups_2024-Update
Potri.006G208500	No alias	RNA binding (RRM/RBD/RNP motifs) family protein	0.04	Orthogroups_2024-Update
Sobic.008G185900.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
MF	GO:0016881	acid-amino acid ligase activity	IEP	Predicted GO
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Predicted GO
MF	GO:0043022	ribosome binding	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	33	95

External Links

No external refs found!