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  5. Seita.2G130600.1

Seita.2G130600.1


Description : E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG)


Gene families : OG_42_0000469 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G130600.1
Cluster HCAA Clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G477113 No alias RING domain ligase1 0.03 Orthogroups_2024-Update
HORVU3Hr1G110890.6 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G090830.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.03 Orthogroups_2024-Update
MA_462034g0010 No alias (at1g79380 : 112.0) Ca(2)-dependent phospholipid-binding... 0.04 Orthogroups_2024-Update
Sobic.008G088806.1 No alias E3 ubiquitin ligase *(RGLG) & E3 ubiquitin ligase *(RGLG) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
InterPro domains Description Start Stop
IPR010734 Copine 77 291
No external refs found!