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  5. Seita.2G137200.1

Seita.2G137200.1


Description : pectin methylesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Setaria italica: Seita.2G137200.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
At3g17060 No alias Probable pectinesterase 67... 0.02 Orthogroups_2024-Update
At3g29090 No alias Pectinesterase 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVQ0] 0.02 Orthogroups_2024-Update
At5g55590 No alias Pectinesterase QRT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM79] 0.02 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G173500 No alias Pectin lyase-like superfamily protein 0.01 Orthogroups_2024-Update
Glyma.13G060900 No alias pectin methylesterase 31 0.03 Orthogroups_2024-Update
Glyma.14G014500 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G076580.1 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
LOC_Os03g19610 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_87592g0010 No alias (at2g21610 : 332.0) pectinesterase 11 (PE11); FUNCTIONS... 0.01 Orthogroups_2024-Update
Mp2g01420.1 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
Mp2g19430.1 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
PSME_00014679-RA No alias (at5g19730 : 298.0) Pectin lyase-like superfamily... 0.01 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.01 Orthogroups_2024-Update
Potri.007G015700 No alias Pectin lyase-like superfamily protein 0.01 Orthogroups_2024-Update
Potri.013G008100 No alias Pectin lyase-like superfamily protein 0.01 Orthogroups_2024-Update
Seita.5G313900.1 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
Seita.9G259700.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Solyc04g080530 No alias Pectinesterase (AHRD V3.3 *** K4BVD2_SOLLC) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 12 304
No external refs found!