Description : peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2 cis-trans-isomerase
Gene families : OG_42_0000307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000307_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.2G137800.1 | |
Cluster | HCAA Clusters: Cluster_45 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
165790 | No alias | rotamase CYP 3 | 0.03 | Orthogroups_2024-Update | |
A4A49_27145 | No alias | peptidyl-prolyl cis-trans isomerase cyp19-3 | 0.04 | Orthogroups_2024-Update | |
At3g56070 | No alias | Peptidyl-prolyl cis-trans isomerase CYP19-3... | 0.07 | Orthogroups_2024-Update | |
At5g13120 | No alias | Peptidyl-prolyl cis-trans isomerase... | 0.03 | Orthogroups_2024-Update | |
Brara.C01118.1 | No alias | peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... | 0.03 | Orthogroups_2024-Update | |
GRMZM2G326111 | No alias | Cyclophilin-like peptidyl-prolyl cis-trans isomerase... | 0.03 | Orthogroups_2024-Update | |
Glyma.03G251600 | No alias | rotamase cyclophilin 2 | 0.05 | Orthogroups_2024-Update | |
Glyma.19G222600 | No alias | rotamase CYP 4 | 0.05 | Orthogroups_2024-Update | |
LOC_Os09g39780 | No alias | peptidyl-prolyl cis-trans isomerase, putative, expressed | 0.04 | Orthogroups_2024-Update | |
Sobic.002G138800.1 | No alias | peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2... | 0.12 | Orthogroups_2024-Update | |
Solyc08g067090 | No alias | cyclophilin-like protein | 0.04 | Orthogroups_2024-Update | |
Solyc11g006070 | No alias | Peptidyl-prolyl cis-trans isomerase (AHRD V3.3 *** M1CSR8_SOLTU) | 0.07 | Orthogroups_2024-Update | |
Sopen11g002010 | No alias | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEA | 16Dec |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
CC | GO:0019867 | outer membrane | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
CC | GO:0031090 | organelle membrane | IEP | Predicted GO |
CC | GO:0031966 | mitochondrial membrane | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
CC | GO:0098805 | whole membrane | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002130 | Cyclophilin-type_PPIase_dom | 15 | 170 |
No external refs found! |