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  5. Seita.2G142500.1

Seita.2G142500.1


Description : regulatory protein *(CYCLASE) of Programmed Cell Death


Gene families : OG_42_0002160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G142500.1
Cluster HCAA Clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Bradi3g06350 No alias Cyclase family protein 0.03 Orthogroups_2024-Update
Potri.009G097300 No alias Cyclase family protein 0.03 Orthogroups_2024-Update
Sopen10g019960 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen10g020100 No alias Putative cyclase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004061 arylformamidase activity IEA 16Dec
BP GO:0019441 tryptophan catabolic process to kynurenine IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0004730 pseudouridylate synthase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007325 KFase/CYL 67 226
No external refs found!