Seita.2G152000.1

Description : subfamily ABCG transporter

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.2G152000.1
Cluster	HCAA Clusters: Cluster_400

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g43120	No alias	pleiotropic drug resistance 12	0.04	Orthogroups_2024-Update
Bradi2g43150	No alias	pleiotropic drug resistance 12	0.01	Orthogroups_2024-Update
Brara.C02383.1	No alias	abscisic acid transporter *(ABCG31) & subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Brara.D01603.1	No alias	cuticular lipid exporter *(PEC1) & subfamily ABCG transporter	0.02	Orthogroups_2024-Update
LOC_Os09g16449	No alias	pleiotropic drug resistance protein 4, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00005403-RA	No alias	(q8gu88\|pdr7_orysa : 1833.0) Putative pleiotropic drug...	0.01	Orthogroups_2024-Update
PSME_00012292-RA	No alias	(at2g29940 : 1536.0) pleiotropic drug resistance 3...	0.03	Orthogroups_2024-Update
PSME_00012870-RA	No alias	(q76cu2\|pdr1_tobac : 1718.0) Pleiotropic drug resistance...	0.04	Orthogroups_2024-Update
Potri.010G153600	No alias	pleiotropic drug resistance 9	0.02	Orthogroups_2024-Update
Pp1s170_10V6	No alias	atp-binding cassette	0.01	Orthogroups_2024-Update
Seita.5G221600.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.003G215300.2	No alias	subfamily ABCG transporter	0.01	Orthogroups_2024-Update
Sobic.003G215800.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.005G183900.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
Solyc05g053600	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0043531	ADP binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	557	768
IPR013525	ABC_2_trans	1222	1436
IPR013581	PDR_assoc	773	837
IPR003439	ABC_transporter-like	925	1077
IPR003439	ABC_transporter-like	220	402
IPR029481	ABC_trans_N	144	194

External Links

No external refs found!