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  5. Seita.2G152300.1

Seita.2G152300.1


Description : FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G152300.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
At4g19990 No alias FAR1-related sequence 1 [Source:UniProtKB/TrEMBL;Acc:F4JU19] 0.05 Orthogroups_2024-Update
Bradi2g25465 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.05G072100 No alias FAR1-related sequence 5 0.04 Orthogroups_2024-Update
Glyma.14G000400 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Glyma.20G024700 No alias FAR1-related sequence 6 0.03 Orthogroups_2024-Update
LOC_Os01g64210 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os01g71850 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g06820 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g10840 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g21330 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g45300 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g07010 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g39680 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g15510 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g34884 No alias RIPER7 - Ripening-related family protein precursor, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g14020 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.016G018100 No alias FAR1-related sequence 2 0.03 Orthogroups_2024-Update
Seita.4G225600.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G189000.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 184 279
IPR004330 FAR1_DNA_bnd_dom 4 62
No external refs found!