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  5. Seita.2G154500.1

Seita.2G154500.1


Description : Unknown function


Gene families : OG_42_0002298 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G154500.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
A4A49_31901 No alias frigida-like protein 3 0.03 Orthogroups_2024-Update
Glyma.03G096300 No alias FRIGIDA-like protein 0.03 Orthogroups_2024-Update
Glyma.03G096400 No alias FRIGIDA-like protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G051330.1 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00018592-RA No alias (at5g48385 : 373.0) FRIGIDA-like protein; CONTAINS... 0.02 Orthogroups_2024-Update
Potri.014G175200 No alias FRIGIDA-like protein 0.02 Orthogroups_2024-Update
Pp1s110_89V6 No alias No description available 0.02 Orthogroups_2024-Update
Sopen06g002530 No alias Frigida-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006361 transcription initiation from RNA polymerase I promoter IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0140223 general transcription initiation factor activity IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012474 Frigida 153 448
No external refs found!