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  5. Seita.2G154700.1

Seita.2G154700.1


Description : Fasciclin-type arabinogalactan protein


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G154700.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
58104 No alias FASCICLIN-like arabinogalactan 2 0.02 Orthogroups_2024-Update
A4A49_05662 No alias fasciclin-like arabinogalactan protein 3 0.03 Orthogroups_2024-Update
At4g12730 No alias Fasciclin-like arabinogalactan protein 2... 0.03 Orthogroups_2024-Update
Bradi4g34420 No alias FASCICLIN-like arabinogalactan 2 0.04 Orthogroups_2024-Update
Brara.C02483.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
GRMZM2G003752 No alias FASCICLIN-like arabinogalactan-protein 10 0.03 Orthogroups_2024-Update
Glyma.14G004200 No alias FASCICLIN-like arabinogalactan 2 0.05 Orthogroups_2024-Update
HORVU2Hr1G065310.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G086360.2 No alias regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.03 Orthogroups_2024-Update
HORVU4Hr1G082970.2 No alias Fasciclin-type arabinogalactan protein 0.05 Orthogroups_2024-Update
HORVU5Hr1G034040.1 No alias Fasciclin-type arabinogalactan protein 0.03 Orthogroups_2024-Update
LOC_Os08g23180 No alias fasciclin-like arabinogalactan protein 8 precursor,... 0.03 Orthogroups_2024-Update
Pp1s13_239V6 No alias F4L23.2; fasciclin-like arabinogalactan-protein (FLA8)... 0.02 Orthogroups_2024-Update
Seita.6G110400.1 No alias Fasciclin-type arabinogalactan protein 0.05 Orthogroups_2024-Update
Solyc06g076110 No alias Fasciclin-like arabinogalactan family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc07g045440 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc12g006110 No alias Fasciclin-like arabinogalactan protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g037300 No alias Fasciclin domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 203 334
No external refs found!