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  5. Seita.2G162100.1

Seita.2G162100.1


Description : Unknown function


Gene families : OG_42_0000377 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G162100.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Bradi1g77304 No alias ankyrin repeat family protein 0.02 Orthogroups_2024-Update
LOC_Os08g23590 No alias ankyrin repeat domain containing protein, expressed 0.03 Orthogroups_2024-Update
Sobic.001G137800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.001G288000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.008G188800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g040890 No alias Ankyrin repeats (3 copies) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 45 145
IPR002110 Ankyrin_rpt 222 299
IPR002110 Ankyrin_rpt 183 211
No external refs found!