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  5. Seita.2G165700.1

Seita.2G165700.1


Description : peptidyl-prolyl cis-trans isomerase *(FKBP43/53)


Gene families : OG_42_0003984 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003984_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G165700.1
Cluster HCAA Clusters: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
A4A49_22724 No alias peptidyl-prolyl cis-trans isomerase fkbp53 0.03 Orthogroups_2024-Update
Bradi5g10980 No alias FK506 BINDING PROTEIN 53 0.03 Orthogroups_2024-Update
Brara.A01535.1 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) 0.06 Orthogroups_2024-Update
Brara.K01407.1 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) 0.03 Orthogroups_2024-Update
Glyma.11G014400 No alias FK506 BINDING PROTEIN 53 0.04 Orthogroups_2024-Update
Potri.007G000500 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.04 Orthogroups_2024-Update
Sobic.006G095400.1 No alias peptidyl-prolyl cis-trans isomerase *(FKBP43/53) 0.05 Orthogroups_2024-Update
Solyc03g007170 No alias Peptidyl-prolyl cis-trans isomerase FKBP53 (AHRD V3.3... 0.07 Orthogroups_2024-Update
Sopen03g003150 No alias FKBP-type peptidyl-prolyl cis-trans isomerase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 357 422
No external refs found!