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  5. Seita.2G168400.1

Seita.2G168400.1


Description : Unknown function


Gene families : OG_42_0008350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G168400.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Bradi4g27600 No alias RNA recognition motif (RRM)-containing protein 0.02 Orthogroups_2024-Update
Glyma.13G075300 No alias RNA recognition motif (RRM)-containing protein 0.03 Orthogroups_2024-Update
Glyma.20G049400 No alias RNA recognition motif (RRM)-containing protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 56 118
IPR000504 RRM_dom 187 239
IPR012921 SPOC_C 497 612
No external refs found!