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  5. Seita.2G180200.1

Seita.2G180200.1


Description : delta-8 sphingolipid desaturase


Gene families : OG_42_0001587 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001587_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G180200.1
Cluster HCAA Clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
231254 No alias Fatty acid/sphingolipid desaturase 0.03 Orthogroups_2024-Update
A4A49_24021 No alias delta(8)-fatty-acid desaturase 0.03 Orthogroups_2024-Update
A4A49_24023 No alias delta(8)-fatty-acid desaturase 0.04 Orthogroups_2024-Update
Bradi4g28320 No alias Fatty acid/sphingolipid desaturase 0.03 Orthogroups_2024-Update
Brara.D00102.1 No alias delta-8 sphingolipid desaturase 0.03 Orthogroups_2024-Update
Mp6g17330.1 No alias delta-8 sphingolipid desaturase 0.02 Orthogroups_2024-Update
Potri.006G228200 No alias Fatty acid/sphingolipid desaturase 0.04 Orthogroups_2024-Update
Pp1s103_99V6 No alias delta-6 fatty acid desaturase 0.02 Orthogroups_2024-Update
Sobic.002G175400.1 No alias delta-8 sphingolipid desaturase 0.05 Orthogroups_2024-Update
Solyc08g063090 No alias Sphingolipid delta-8 desaturase (AHRD V3.3 *** A4GK73_TOBAC) 0.03 Orthogroups_2024-Update
Sopen05g028480 No alias Fatty acid desaturase 0.03 Orthogroups_2024-Update
Sopen10g005600 No alias Fatty acid desaturase 0.04 Orthogroups_2024-Update
Sopen10g005620 No alias Fatty acid desaturase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 155 420
IPR001199 Cyt_B5-like_heme/steroid-bd 25 94
No external refs found!