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  5. Seita.2G180800.1

Seita.2G180800.1


Description : Unknown function


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G180800.1
Cluster HCAA Clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
Brara.I04085.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.07G171700 No alias PIF1 helicase 0.02 Orthogroups_2024-Update
Glyma.10G108221 No alias Function unknown 0.02 Orthogroups_2024-Update
LOC_Os11g28650 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Seita.4G140900.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA 16Dec
MF GO:0003678 DNA helicase activity IEA 16Dec
BP GO:0006281 DNA repair IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 307 495
No external refs found!