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Description : Unknown function
Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Setaria italica: Seita.2G181600.1 | |
| Cluster | HCAA Clusters: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 8109 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| A4A49_41488 | No alias | e3 ubiquitin-protein ligase rduf1 | 0.03 | Orthogroups_2024-Update | |
| A4A49_41691 | No alias | e3 ubiquitin-protein ligase sdir1 | 0.04 | Orthogroups_2024-Update | |
| At1g26800 | No alias | E3 ubiquitin-protein ligase MPSR1... | 0.03 | Orthogroups_2024-Update | |
| At3g30460 | No alias | RING/U-box superfamily protein... | 0.04 | Orthogroups_2024-Update | |
| At3g60080 | No alias | At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] | 0.03 | Orthogroups_2024-Update | |
| At5g64920 | No alias | CIP8 [Source:UniProtKB/TrEMBL;Acc:A0A178UJC6] | 0.03 | Orthogroups_2024-Update | |
| Bradi1g52440 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g37800 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A02841.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.C02094.1 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Brara.G00930.1 | No alias | E3 ubiquitin ligase *(SNIPER) | 0.04 | Orthogroups_2024-Update | |
| Brara.G02768.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Brara.H02157.1 | No alias | E3 ubiquitin ligase *(SNIPER) | 0.04 | Orthogroups_2024-Update | |
| Brara.I04140.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Cre10.g422050 | No alias | RING/U-box superfamily protein | 0.01 | Orthogroups_2024-Update | |
| GRMZM2G164358 | No alias | RING-H2 finger C1A | 0.02 | Orthogroups_2024-Update | |
| Glyma.04G251600 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G272400 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.09G165200 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.10G244900 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G082500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.20G149700 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G002870.3 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| HORVU0Hr1G019650.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G051760.1 | No alias | Unknown function | 0.06 | Orthogroups_2024-Update | |
| LOC_Os03g26420 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_219769g0010 | No alias | (at5g20910 : 155.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_281830g0010 | No alias | (at5g08139 : 89.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_474338g0010 | No alias | (at2g39720 : 83.2) Encodes a putative RING-H2 finger... | 0.03 | Orthogroups_2024-Update | |
| PSME_00026521-RA | No alias | (at3g19950 : 152.0) RING/U-box superfamily protein;... | 0.04 | Orthogroups_2024-Update | |
| PSME_00054449-RA | No alias | (at2g40830 : 144.0) Encodes a putative RING-H2 finger... | 0.03 | Orthogroups_2024-Update | |
| PSME_00056956-RA | No alias | (at2g40830 : 186.0) Encodes a putative RING-H2 finger... | 0.07 | Orthogroups_2024-Update | |
| Potri.005G062400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.005G090500 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.006G032100 | No alias | RING-H2 finger C1A | 0.03 | Orthogroups_2024-Update | |
| Seita.8G172700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.005G165900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc01g009000 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) | 0.04 | Orthogroups_2024-Update | |
| Sopen02g015860 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update | |
| Sopen03g029300 | No alias | Ring finger domain | 0.04 | Orthogroups_2024-Update | |
| evm.model.contig_4448.17 | No alias | (at3g19950 : 129.0) RING/U-box superfamily protein;... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Predicted GO |
| MF | GO:0004089 | carbonate dehydratase activity | IEP | Predicted GO |
| MF | GO:0004476 | mannose-6-phosphate isomerase activity | IEP | Predicted GO |
| BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Predicted GO |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0055085 | transmembrane transport | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 141 | 183 |
| No external refs found! |