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  5. Seita.2G184500.1

Seita.2G184500.1


Description : 3-ketoacyl-CoA synthase *(KCS)


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G184500.1
Cluster HCAA Clusters: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
79947 No alias 3-ketoacyl-CoA synthase 4 0.02 Orthogroups_2024-Update
A4A49_04047 No alias 3-ketoacyl-coa synthase 6 0.03 Orthogroups_2024-Update
At1g01120 No alias 3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178W124] 0.03 Orthogroups_2024-Update
At2g26250 No alias 3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A178VYA3] 0.03 Orthogroups_2024-Update
At5g49070 No alias Probable 3-ketoacyl-CoA synthase 21... 0.02 Orthogroups_2024-Update
Bradi1g44030 No alias 3-ketoacyl-CoA synthase 6 0.03 Orthogroups_2024-Update
Bradi1g68430 No alias 3-ketoacyl-CoA synthase 1 0.02 Orthogroups_2024-Update
Bradi1g72560 No alias 3-ketoacyl-CoA synthase 10 0.03 Orthogroups_2024-Update
GRMZM2G156620 No alias 3-ketoacyl-CoA synthase 11 0.02 Orthogroups_2024-Update
GRMZM2G393897 No alias 3-ketoacyl-CoA synthase 4 0.02 Orthogroups_2024-Update
HORVU4Hr1G067340.2 No alias 3-ketoacyl-CoA synthase *(KCS) 0.03 Orthogroups_2024-Update
LOC_Os03g08360 No alias 3-ketoacyl-CoA synthase 10, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g14170 No alias 3-ketoacyl-CoA synthase, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00008960-RA No alias (at2g26640 : 707.0) Encodes KCS11, a member of the... 0.03 Orthogroups_2024-Update
Potri.002G178000 No alias 3-ketoacyl-CoA synthase 1 0.03 Orthogroups_2024-Update
Potri.018G032200 No alias 3-ketoacyl-CoA synthase 11 0.02 Orthogroups_2024-Update
Pp1s21_102V6 No alias beta-ketoacyl-coa synthase family protein 0.02 Orthogroups_2024-Update
Pp1s268_29V6 No alias beta-ketoacyl-coa synthase family protein 0.02 Orthogroups_2024-Update
Pp1s30_335V6 No alias beta-ketoacyl-coa synthase family protein 0.03 Orthogroups_2024-Update
Sobic.001G247700.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update
Solyc08g067260 No alias 3-ketoacyl-CoA synthase (AHRD V3.3 *** A0A0V0IHH6_SOLCH) 0.03 Orthogroups_2024-Update
Solyc12g006820 No alias 3-ketoacyl-CoA synthase (AHRD V3.3 *** M0ZKJ4_SOLTU) 0.03 Orthogroups_2024-Update
Sopen08g021190 No alias FAE1/Type III polyketide synthase-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 46 328
IPR013747 ACP_syn_III_C 353 433
No external refs found!