Seita.2G184700.1

Description : mTERF-type transcription factor

Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.2G184700.1
Cluster	HCAA Clusters: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
A4A49_33246	No alias	hypothetical protein	0.02	Orthogroups_2024-Update
At5g07900	No alias	Mitochondrial transcription termination factor family...	0.02	Orthogroups_2024-Update
Bradi1g45320	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Bradi1g45347	No alias	Mitochondrial transcription termination factor family protein	0.04	Orthogroups_2024-Update
Bradi3g59147	No alias	Mitochondrial transcription termination factor family protein	0.04	Orthogroups_2024-Update
Bradi3g59160	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Bradi4g20547	No alias	Mitochondrial transcription termination factor family protein	0.05	Orthogroups_2024-Update
GRMZM2G012999	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
GRMZM2G161146	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Glyma.09G046000	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Glyma.17G024500	No alias	Mitochondrial transcription termination factor family protein	0.04	Orthogroups_2024-Update
Glyma.18G112100	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G064880.2	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G043150.2	No alias	mTERF-type transcription factor	0.05	Orthogroups_2024-Update
LOC_Os04g54510	No alias	mTERF family protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g33460	No alias	mTERF domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g34160	No alias	mTERF domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g14130	No alias	mTERF family protein, expressed	0.01	Orthogroups_2024-Update
MA_10429074g0010	No alias	(at5g64950 : 103.0) Mitochondrial transcription...	0.05	Orthogroups_2024-Update
MA_21437g0010	No alias	(at1g79220 : 92.4) Mitochondrial transcription...	0.05	Orthogroups_2024-Update
MA_760114g0010	No alias	(at5g64950 : 80.1) Mitochondrial transcription...	0.01	Orthogroups_2024-Update
PSME_00000442-RA	No alias	no hits & (original description: no original description)	0.09	Orthogroups_2024-Update
PSME_00009256-RA	No alias	(at1g62110 : 82.4) Mitochondrial transcription...	0.11	Orthogroups_2024-Update
PSME_00032600-RA	No alias	(at5g64950 : 90.5) Mitochondrial transcription...	0.01	Orthogroups_2024-Update
PSME_00057103-RA	No alias	(at3g46950 : 137.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
Potri.001G035000	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Potri.004G012900	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Potri.014G133200	No alias	Mitochondrial transcription termination factor family protein	0.01	Orthogroups_2024-Update
Seita.4G092000.1	No alias	mTERF-type transcription factor	0.11	Orthogroups_2024-Update
Seita.4G095600.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc04g072490	No alias	Epidermal patterning factor (AHRD V3.3 *** A0A072V8D7_MEDTR)	0.05	Orthogroups_2024-Update
Solyc04g072500	No alias	Mitochondrial transcription termination factor family...	0.04	Orthogroups_2024-Update
Sopen04g028720	No alias	mTERF	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Predicted GO
MF	GO:0003777	microtubule motor activity	IEP	Predicted GO
BP	GO:0006928	movement of cell or subcellular component	IEP	Predicted GO
BP	GO:0007017	microtubule-based process	IEP	Predicted GO
BP	GO:0007018	microtubule-based movement	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
MF	GO:0016787	hydrolase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003690	MTERF	73	312

External Links

No external refs found!

Seita.2G184700.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation