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  5. Seita.2G190400.1

Seita.2G190400.1


Description : Unknown function


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G190400.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
At3g23880 No alias F-box/kelch-repeat protein At3g23880... 0.02 Orthogroups_2024-Update
Bradi4g29240 No alias F-box and associated interaction domains-containing protein 0.05 Orthogroups_2024-Update
Brara.B02669.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.C03146.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G049364 No alias F-box and associated interaction domains-containing protein 0.05 Orthogroups_2024-Update
Potri.001G318300 No alias F-box family protein 0.03 Orthogroups_2024-Update
Potri.002G223000 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.014G162600 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 203 298
IPR001810 F-box_dom 16 52
No external refs found!