Seita.2G207200.1

Description : Unknown function

Gene families : OG_42_0000660 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000660_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.2G207200.1
Cluster	HCAA Clusters: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
A4A49_14405	No alias	hypothetical protein	0.02	Orthogroups_2024-Update
Bradi3g38950	No alias	DNA glycosylase superfamily protein	0.03	Orthogroups_2024-Update
Bradi4g30437	No alias	DNA glycosylase superfamily protein	0.04	Orthogroups_2024-Update
Bradi5g14770	No alias	DNA glycosylase superfamily protein	0.04	Orthogroups_2024-Update
GRMZM2G164062	No alias	DNA glycosylase superfamily protein	0.03	Orthogroups_2024-Update
Glyma.06G219600	No alias	DNA glycosylase superfamily protein	0.04	Orthogroups_2024-Update
Glyma.08G232900	No alias	DNA glycosylase superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G073900	No alias	DNA glycosylase superfamily protein	0.07	Orthogroups_2024-Update
HORVU3Hr1G078260.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
HORVU3Hr1G087420.2	No alias	Unknown function	0.06	Orthogroups_2024-Update
HORVU4Hr1G070650.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU5Hr1G065200.16	No alias	Unknown function	0.05	Orthogroups_2024-Update
LOC_Os01g58550	No alias	methyladenine glycosylase, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g42290	No alias	methyladenine glycosylase, putative, expressed	0.03	Orthogroups_2024-Update
MA_114043g0010	No alias	(at5g44680 : 278.0) DNA glycosylase superfamily protein;...	0.03	Orthogroups_2024-Update
MA_319186g0010	No alias	(at1g13635 : 172.0) DNA glycosylase superfamily protein;...	0.03	Orthogroups_2024-Update
Potri.001G074700	No alias	DNA glycosylase superfamily protein	0.04	Orthogroups_2024-Update
Seita.6G191700.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003905	alkylbase DNA N-glycosylase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006284	base-excision repair	IEA	16Dec
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEA	16Dec
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
MF	GO:0019104	DNA N-glycosylase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043733	DNA-3-methylbase glycosylase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0009250	glucan biosynthetic process	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
BP	GO:0051273	beta-glucan metabolic process	IEP	Predicted GO
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005019	Adenine_glyco	186	359

External Links

No external refs found!

Seita.2G207200.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation