1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.2G207600.1

Seita.2G207600.1


Description : Unknown function


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G207600.1
Cluster HCAA Clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
At4g37590 No alias BTB/POZ domain-containing protein NPY5... 0.03 Orthogroups_2024-Update
Bradi1g09246 No alias Phototropic-responsive NPH3 family protein 0.05 Orthogroups_2024-Update
Brara.I03328.1 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 Orthogroups_2024-Update
Brara.I05548.1 No alias substrate adaptor *(SETH6) of CUL3-BTB E3 ubiquitin... 0.04 Orthogroups_2024-Update
GRMZM2G169782 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.08G069800 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.11G049800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.05 Orthogroups_2024-Update
PSME_00048349-RA No alias (at5g48800 : 604.0) Phototropic-responsive NPH3 family... 0.05 Orthogroups_2024-Update
Potri.007G053200 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Seita.6G074900.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 118 371
No external refs found!