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  5. Seita.2G209100.1

Seita.2G209100.1


Description : catalytic component *(CesA) of cellulose synthase complex


Gene families : OG_42_0000159 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G209100.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
141535 No alias cellulose synthase 1 0.02 Orthogroups_2024-Update
75715 No alias Cellulose synthase family protein 0.03 Orthogroups_2024-Update
A4A49_36598 No alias cellulose synthase a catalytic subunit 3 [udp-forming] 0.04 Orthogroups_2024-Update
Bradi4g30540 No alias Cellulose synthase family protein 0.04 Orthogroups_2024-Update
GRMZM2G027723 No alias cellulose synthase 1 0.06 Orthogroups_2024-Update
Glyma.04G067900 No alias cellulose synthase 1 0.03 Orthogroups_2024-Update
Glyma.04G153700 No alias Cellulose synthase family protein 0.03 Orthogroups_2024-Update
LOC_Os03g62090 No alias CESA5 - cellulose synthase, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g35020 No alias CSLH2 - cellulose synthase-like family H, expressed 0.03 Orthogroups_2024-Update
PSME_00003324-RA No alias (at5g44030 : 1405.0) Encodes a cellulose synthase... 0.05 Orthogroups_2024-Update
PSME_00003722-RA No alias (at4g18780 : 1327.0) Encodes a member of the cellulose... 0.04 Orthogroups_2024-Update
PSME_00004348-RA No alias (at5g17420 : 534.0) Encodes a xylem-specific cellulose... 0.05 Orthogroups_2024-Update
PSME_00015179-RA No alias (at5g17420 : 1472.0) Encodes a xylem-specific cellulose... 0.04 Orthogroups_2024-Update
PSME_00019107-RA No alias (at5g05170 : 1626.0) Encodes a cellulose synthase... 0.04 Orthogroups_2024-Update
PSME_00036267-RA No alias (at5g17420 : 551.0) Encodes a xylem-specific cellulose... 0.03 Orthogroups_2024-Update
Sobic.001G224300.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.04 Orthogroups_2024-Update
Sobic.002G205500.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.04 Orthogroups_2024-Update
Sobic.003G296400.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.04 Orthogroups_2024-Update
Solyc08g061100 No alias Cellulose synthase (AHRD V3.3 *** M1BV52_SOLTU) 0.03 Orthogroups_2024-Update
Sopen04g027640 No alias Cellulose synthase 0.03 Orthogroups_2024-Update
Sopen09g028610 No alias Cellulose synthase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA 16Dec
BP GO:0030244 cellulose biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027934 CES_Znf_RING 27 103
IPR005150 Cellulose_synth 342 1044
No external refs found!