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  5. Seita.2G212900.1

Seita.2G212900.1


Description : ligand-gated cation channel *(GLR)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G212900.1
Cluster HCAA Clusters: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
Bradi1g26030 No alias glutamate receptor 3.4 0.04 Orthogroups_2024-Update
Bradi1g31350 No alias glutamate receptor 2.2 0.06 Orthogroups_2024-Update
Bradi4g30850 No alias glutamate receptor 2.7 0.05 Orthogroups_2024-Update
Bradi4g30860 No alias glutamate receptor 2.7 0.05 Orthogroups_2024-Update
Bradi4g30880 No alias glutamate receptor 2.7 0.05 Orthogroups_2024-Update
Bradi5g19560 No alias glutamate receptor 3.3 0.03 Orthogroups_2024-Update
Brara.I03484.1 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
GRMZM2G139933 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Glyma.07G226400 No alias glutamate receptor 2.8 0.02 Orthogroups_2024-Update
Glyma.09G197400 No alias glutamate receptor 3.3 0.03 Orthogroups_2024-Update
Glyma.13G172100 No alias glutamate receptor 2.7 0.05 Orthogroups_2024-Update
Glyma.13G272400 No alias glutamate receptor 2.8 0.02 Orthogroups_2024-Update
HORVU2Hr1G064530.8 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
HORVU5Hr1G063420.2 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
LOC_Os06g06130 No alias glutamate receptor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g08900 No alias glutamate receptor 2.6 precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g33790 No alias glutamate receptor 3.4 precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10140272g0010 No alias no hits & (original description: no original description) 0.08 Orthogroups_2024-Update
MA_10428186g0030 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_958834g0010 No alias (at4g35290 : 358.0) Encodes a putative glutamate... 0.03 Orthogroups_2024-Update
PSME_00000830-RA No alias (at2g29100 : 521.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00000831-RA No alias (at4g35290 : 118.0) Encodes a putative glutamate... 0.05 Orthogroups_2024-Update
PSME_00001097-RA No alias (at2g29120 : 619.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
PSME_00001098-RA No alias (at2g29120 : 637.0) member of Putative ligand-gated ion... 0.02 Orthogroups_2024-Update
PSME_00001292-RA No alias (at4g35290 : 567.0) Encodes a putative glutamate... 0.06 Orthogroups_2024-Update
PSME_00005234-RA No alias (at1g05200 : 189.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00021963-RA No alias (at1g05200 : 294.0) member of Putative ligand-gated ion... 0.06 Orthogroups_2024-Update
PSME_00021964-RA No alias (at1g05200 : 282.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00023170-RA No alias (at1g42540 : 830.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00027644-RA No alias (at2g29120 : 490.0) member of Putative ligand-gated ion... 0.04 Orthogroups_2024-Update
PSME_00032127-RA No alias (at4g35290 : 436.0) Encodes a putative glutamate... 0.04 Orthogroups_2024-Update
PSME_00037073-RA No alias (at2g17260 : 246.0) Encodes a glutamate receptor.... 0.04 Orthogroups_2024-Update
PSME_00045289-RA No alias (at2g17260 : 248.0) Encodes a glutamate receptor.... 0.02 Orthogroups_2024-Update
Potri.006G269400 No alias glutamate receptor 2.8 0.02 Orthogroups_2024-Update
Potri.011G062750 No alias glutamate receptor 2.7 0.02 Orthogroups_2024-Update
Potri.018G011800 No alias glutamate receptor 2.8 0.03 Orthogroups_2024-Update
Seita.1G009400.1 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
Seita.1G346100.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Seita.2G212500.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Seita.2G212600.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Sobic.002G208700.1 No alias ligand-gated cation channel *(GLR) 0.02 Orthogroups_2024-Update
Sobic.002G209100.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Sobic.004G013300.1 No alias ligand-gated cation channel *(GLR) 0.05 Orthogroups_2024-Update
Sobic.004G324000.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Sobic.010G231500.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Solyc07g052400 No alias glutamate receptor-like 3.2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR001828 ANF_lig-bd_rcpt 61 407
IPR001638 Solute-binding_3/MltF_N 494 805
IPR001320 Iontro_rcpt 806 836
No external refs found!