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  5. Seita.2G221500.1

Seita.2G221500.1


Description : Unknown function


Gene families : OG_42_0000312 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G221500.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_31779 No alias f-boxfbd/lrr-repeat protein 0.04 Orthogroups_2024-Update
LOC_Os08g16700 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_130894g0010 No alias (at5g56420 : 83.6) F-box/RNI-like/FBD-like... 0.02 Orthogroups_2024-Update
PSME_00008603-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Seita.6G175000.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 27 63
No external refs found!