Seita.2G228500.1

Description : NAC-type transcription factor

Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.2G228500.1
Cluster	HCAA Clusters: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g53770	No alias	NAC domain containing protein 102	0.03	Orthogroups_2024-Update
Bradi4g23640	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.04G208300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Glyma.05G202300	No alias	NAC domain containing protein 83	0.03	Orthogroups_2024-Update
Glyma.12G221400	No alias	NAC domain containing protein 2	0.04	Orthogroups_2024-Update
Glyma.17G002800	No alias	NAC domain containing protein 35	0.04	Orthogroups_2024-Update
LOC_Os01g59640	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g12340	No alias	NAC domain-containing protein 67, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g07790	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_10434250g0010	No alias	(at2g02450 : 274.0) NAC domain containing protein 35...	0.05	Orthogroups_2024-Update
MA_18153g0010	No alias	(at1g52880 : 291.0) Transcription factor with a NAC...	0.03	Orthogroups_2024-Update
MA_5115g0010	No alias	(q7f2l3\|nac48_orysa : 256.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
PSME_00001409-RA	No alias	(at2g02450 : 280.0) NAC domain containing protein 35...	0.02	Orthogroups_2024-Update
PSME_00001411-RA	No alias	(at2g02450 : 278.0) NAC domain containing protein 35...	0.03	Orthogroups_2024-Update
PSME_00030259-RA	No alias	(q7f2l3\|nac48_orysa : 263.0) NAC domain-containing...	0.03	Orthogroups_2024-Update
Seita.5G069100.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G039200.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Predicted GO
BP	GO:0006605	protein targeting	IEP	Predicted GO
BP	GO:0006612	protein targeting to membrane	IEP	Predicted GO
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Predicted GO
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	Predicted GO
MF	GO:0008312	7S RNA binding	IEP	Predicted GO
BP	GO:0015994	chlorophyll metabolic process	IEP	Predicted GO
BP	GO:0015996	chlorophyll catabolic process	IEP	Predicted GO
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033015	tetrapyrrole catabolic process	IEP	Predicted GO
BP	GO:0033365	protein localization to organelle	IEP	Predicted GO
BP	GO:0034613	cellular protein localization	IEP	Predicted GO
BP	GO:0042440	pigment metabolic process	IEP	Predicted GO
BP	GO:0045047	protein targeting to ER	IEP	Predicted GO
BP	GO:0046149	pigment catabolic process	IEP	Predicted GO
MF	GO:0047746	chlorophyllase activity	IEP	Predicted GO
CC	GO:0048500	signal recognition particle	IEP	Predicted GO
BP	GO:0051187	cofactor catabolic process	IEP	Predicted GO
BP	GO:0070727	cellular macromolecule localization	IEP	Predicted GO
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Predicted GO
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predicted GO
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Predicted GO
BP	GO:0072657	protein localization to membrane	IEP	Predicted GO
BP	GO:0090150	establishment of protein localization to membrane	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	10	139

External Links

No external refs found!

Seita.2G228500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation