Seita.2G230000.1

Description : alpha amylase

Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.2G230000.1
Cluster	HCAA Clusters: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G103055	No alias	alpha-amylase-like	0.03	Orthogroups_2024-Update
Glyma.15G016000	No alias	alpha-amylase-like 3	0.02	Orthogroups_2024-Update
LOC_Os04g33040	No alias	alpha-amylase precursor, putative, expressed	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006284	base-excision repair	IEP	Predicted GO
BP	GO:0006488	dolichol-linked oligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006047	Glyco_hydro_13_cat_dom	124	269

External Links

No external refs found!