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  5. Seita.2G237100.1

Seita.2G237100.1


Description : starch-debranching isoamylase *(ISA3)


Gene families : OG_42_0001338 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G237100.1
Cluster HCAA Clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Bradi3g40410 No alias isoamylase 1 0.03 Orthogroups_2024-Update
PSME_00029548-RA No alias (at4g09020 : 409.0) Encodes an isoamylase-like protein.... 0.02 Orthogroups_2024-Update
Potri.002G100900 No alias isoamylase 3 0.02 Orthogroups_2024-Update
Potri.002G215400 No alias debranching enzyme 1 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 104 200
IPR006047 Glyco_hydro_13_cat_dom 408 628
IPR006047 Glyco_hydro_13_cat_dom 271 389
No external refs found!