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  5. Seita.2G246100.1

Seita.2G246100.1


Description : Unknown function


Gene families : OG_42_0001070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001070_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G246100.1
Cluster HCAA Clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
PSME_00042413-RA No alias (at1g55790 : 157.0) FUNCTIONS IN: metal ion binding;... 0.03 Orthogroups_2024-Update
PSME_00046690-RA No alias (at1g55790 : 203.0) FUNCTIONS IN: metal ion binding;... 0.03 Orthogroups_2024-Update
Potri.011G141600 No alias Domain of unknown function (DUF2431) 0.03 Orthogroups_2024-Update
Sopen07g034110 No alias Domain of unknown function (DUF2431) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEA 16Dec
BP GO:0070475 rRNA base methylation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR019446 DUF2431 102 267
No external refs found!