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  5. Seita.2G252900.1

Seita.2G252900.1


Description : transcriptional co-activator *(FBH) & bHLH-type transcription factor


Gene families : OG_42_0000702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G252900.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
A4A49_15975 No alias transcription factor bhlh130 0.02 Orthogroups_2024-Update
A4A49_28561 No alias transcription factor bhlh130 0.03 Orthogroups_2024-Update
A4A49_35650 No alias transcription factor bhlh128 0.02 Orthogroups_2024-Update
Bradi3g39927 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.C02187.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Brara.D02568.1 No alias transcriptional co-activator *(FBH) & bHLH-type... 0.02 Orthogroups_2024-Update
Brara.J00400.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM5G879527 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G152500 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
Glyma.15G271900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G054910.7 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G050540.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g41229 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g31300 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.05 Orthogroups_2024-Update
Potri.014G150600 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s34_227V6 No alias F12A4.2; basic helix-loop-helix (bHLH) family protein... 0.03 Orthogroups_2024-Update
Sopen01g033890 No alias Helix-loop-helix DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen09g036050 No alias Helix-loop-helix DNA-binding domain 0.05 Orthogroups_2024-Update
Sopen10g029690 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g023410 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 324 370
No external refs found!