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  5. Seita.2G253100.1

Seita.2G253100.1


Description : EC_4.3 carbon-nitrogen lyase


Gene families : OG_42_0000149 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.2G253100.1
Cluster HCAA Clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Brara.G03215.1 No alias EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update
Glyma.05G016500 No alias Calcium-dependent phosphotriesterase superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G428300.1 No alias regulatory protein *(LAP3) of exine formation & EC_4.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0016844 strictosidine synthase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 180 268
No external refs found!